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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
single cell RNA-seq
49
total RNA-seq
11
ATAC-seq
6
snATAC-seq
2
STARR-seq
1
Hi-C
Assay category
107
Transcription
17
DNA accessibility
1
3D chromatin structure
Date released
66
August, 2021
47
September, 2023
14
May, 2023
Available data
64
bed narrowPeak
xls
57
txt
1
hic
Organism
127
Homo sapiens
Biosample type
125
tissue
2
cell line
Organ
221
pancreas
158
epithelium
127
kidney
71
liver
19
lung
8
blood
8
bodily fluid
5
connective tissue
1
bone element
1
bone marrow
1
thymus
Project
80
AMP
47
KPMP
Genome assembly (visualization)
11
GRCh38
1
hg19
Lab
AMP-T2D consortium
78
Katalin Susztak, Upenn
47
KPMP
2
Bing Ren, UCSD
files.file_type!
xls
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
127 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
snATAC-seq
STARR-seq
Hi-C
tissue
kidney
58
49
11
6
1
cell line
HEK293T
2
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