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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
316
ChIP-seq
Assay category
316
DNA binding
Target of assay
244
transcription factor
88
histone
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
other context
2
other post-translational modification
Date released
715
February, 2021
316
November, 2017
314
May, 2020
259
May, 2021
235
August, 2021
212
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
85
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
315
bam
304
fastq
257
bigWig
237
bed narrowPeak
237
bigBed narrowPeak
46
bed broadPeak
46
bigBed broadPeak
11
tagAlign
3
tar
Organism
316
Homo sapiens
Biosample type
298
cell line
12
tissue
6
primary cell
Organ
298
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
316
AMP
Genome assembly (visualization)
255
hg19
205
GRCh38
Lab
316
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
files.file_type!
xls
target.investigated_as!
histone modification
other context
BIOSAMPLE
ASSAY
316 results
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Clear Filters
ChIP-seq
cell line
HepG2
298
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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