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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
RRBS
7
WGBS
1
DNAme array
1
whole genome sequencing assay
Assay category
964
DNA binding
639
Transcription
302
DNA accessibility
18
3D chromatin structure
18
DNA methylation
1
DNA sequencing
Date released
9
July, 2019
6
February, 2021
1
August, 2017
1
August, 2021
1
May, 2021
1
November, 2018
Available data
zippedFastqFolder
11
bed bedMethyl
11
bigBed bedMethyl
8
fastq
6
tsv
1
bam
1
bigWig
1
vcf
Organism
19
Homo sapiens
Biosample type
tissue
17
primary cell
2
cell line
Organ
12
epithelium
6
pancreas
3
kidney
3
liver
1
brain
1
connective tissue
1
eye
1
heart
1
musculature of body
1
vasculature
Project
13
AMP
6
HPAP
Genome assembly (visualization)
10
hg19
1
GRCh38
Lab
12
AMP-T2D consortium
6
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
files.file_type!
zippedFastqFolder
biosample_type!
tissue
BIOSAMPLE
ASSAY
19 results
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RRBS
WGBS
DNAme array
whole genome sequencing assay
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
cell line
HepG2
1
1
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