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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
WGBS
15
RRBS
1
DNAme array
Assay category
1838
Transcription
1827
DNA binding
705
DNA accessibility
49
DNA methylation
28
3D chromatin structure
1
DNA sequencing
Date released
24
July, 2019
11
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
zippedFastqFolder
31
bed bedMethyl
31
bigBed bedMethyl
19
fastq
17
bam
16
bigWig
6
tsv
Organism
49
Homo sapiens
Biosample type
33
tissue
15
primary cell
1
cell line
Organ
12
epithelium
12
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
eye
1
limb
1
pericardium
Project
43
AMP
6
HPAP
Genome assembly (visualization)
16
GRCh38
15
hg19
Lab
43
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
files.file_type!
zippedFastqFolder
organ_slims!
eye
musculature of body
BIOSAMPLE
ASSAY
49 results
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WGBS
RRBS
DNAme array
tissue
heart left ventricle
4
1
liver
3
1
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 11 more…
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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