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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
161
ATAC-seq
135
single cell RNA-seq
35
snATAC-seq
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
6
WGBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
135
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
21
September, 2020
12
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
128
fastq
100
bam
100
bigWig
100
tsv
zippedFastqFolder
2
csv
Organism
135
Homo sapiens
Biosample type
174
tissue
135
primary cell
2
in vitro differentiated cells
Organ
74
pancreas
70
epithelium
4
connective tissue
3
brain
Project
102
AMP
33
HPAP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
102
AMP-T2D consortium
33
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
135 results
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single cell RNA-seq
primary cell
Langerhans cell
33
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
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