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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
33
single cell RNA-seq
27
snATAC-seq
10
ATAC-seq
6
WGBS
Hi-C
Assay category
125
Transcription
37
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
45
February, 2021
40
September, 2020
7
August, 2020
Available data
169
fastq
zippedFastqFolder
10
bigWig
6
tsv
Organism
168
Homo sapiens
Biosample type
168
primary cell
Organ
69
epithelium
69
pancreas
Project
168
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3886
AMP-T2D consortium
343
Kyle Gaulton, UCSD
168
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
35
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
files.file_type!
zippedFastqFolder
assay_title!
Hi-C
BIOSAMPLE
ASSAY
168 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
WGBS
primary cell
Langerhans cell
33
27
pancreatic alpha cell
42
7
6
exocrine cell
39
pancreatic beta cell
11
3
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