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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
8
WGBS
Assay category
27
DNA methylation
Date released
23
July, 2019
November, 2018
4
August, 2017
Available data
2864
bam
2665
bigWig
1732
bed narrowPeak
1227
fastq
1199
tsv
960
bigBed narrowPeak
390
tagAlign
311
bed broadPeak
275
bigBed broadPeak
259
bed bed3+
161
txt
zippedFastqFolder
64
xls
27
bed bedMethyl
27
bigBed bedMethyl
23
hic
22
bedpe bed3+
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
27
Homo sapiens
Biosample type
17
tissue
10
primary cell
Organ
8
heart
6
epithelium
4
kidney
4
musculature of body
3
connective tissue
adipose tissue
2
brain
2
liver
2
pancreas
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
27
AMP
Genome assembly (visualization)
19
hg19
8
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
zippedFastqFolder
organ_slims!
adipose tissue
month_released!
November, 2018
BIOSAMPLE
ASSAY
27 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
skeletal muscle tissue
2
aorta
1
brain
1
+ See 8 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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