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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
2
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
16
DNA binding
4
DNA accessibility
2
3D chromatin structure
Target of assay
16
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
control
Date released
21
October, 2019
1
March, 2020
Available data
19
bam
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tagAlign
1
tar
Organism
22
Homo sapiens
Biosample type
20
primary cell
2
tissue
Organ
813
pancreas
683
liver
649
connective tissue
467
adipose tissue
414
epithelium
373
heart
342
kidney
255
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
63
blood
63
bodily fluid
60
eye
32
nerve
30
embryo
20
lung
20
vein
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
18
hg19
13
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
zippedFastqFolder
target.investigated_as!
control
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
15
2
2
1
tissue
islet of Langerhans
1
pituitary gland
1
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