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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
70
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
392
November, 2017
234
October, 2019
218
June, 2019
193
August, 2017
120
May, 2019
104
May, 2021
95
May, 2020
94
December, 2017
87
November, 2018
79
April, 2019
74
October, 2018
46
September, 2018
39
November, 2019
34
August, 2021
34
December, 2018
27
February, 2021
25
January, 2019
24
February, 2018
18
May, 2022
17
July, 2019
15
October, 2017
11
September, 2017
3
March, 2020
2
November, 2020
1
March, 2019
Available data
87
bam
87
fastq
80
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
87
Homo sapiens
Biosample type
61
cell line
26
tissue
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
87
AMP
Genome assembly (visualization)
79
GRCh38
71
hg19
Lab
87
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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