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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
209
DNase-seq
175
ATAC-seq
18
WGBS
5
FAIRE-seq
Assay category
1578
DNA binding
1406
Transcription
389
DNA accessibility
18
DNA methylation
Date released
187
June, 2019
45
May, 2020
26
November, 2019
18
February, 2021
18
May, 2022
17
July, 2019
17
November, 2018
15
October, 2019
14
September, 2018
13
May, 2021
12
August, 2017
10
August, 2021
7
October, 2017
5
September, 2017
2
November, 2020
1
March, 2019
Available data
492
bed narrowPeak
407
bam
367
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
123
fastq
101
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
407
Homo sapiens
Biosample type
262
tissue
114
primary cell
18
in vitro differentiated cells
13
cell line
Organ
80
kidney
79
pancreas
48
heart
45
limb
42
epithelium
35
brain
34
musculature of body
25
vasculature
23
blood vessel
18
ureter
16
connective tissue
14
artery
9
liver
8
bone element
8
skeleton
7
adipose tissue
4
eye
4
spleen
3
nerve
3
vein
Project
407
AMP
Genome assembly (visualization)
363
hg19
335
GRCh38
Lab
388
AMP-T2D consortium
18
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
19
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
407 results
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Clear Filters
DNase-seq
ATAC-seq
WGBS
FAIRE-seq
tissue
islet of Langerhans
1
38
1
heart
18
1
muscle of arm
17
brain
14
kidney
13
1
+ See 55 more…
primary cell
monocyte
15
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 49 more…
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
1
EndoC_BH1
1
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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