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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
177
DNase-seq
64
ATAC-seq
4
FAIRE-seq
Assay category
923
Transcription
722
DNA binding
245
DNA accessibility
17
DNA methylation
Date released
163
June, 2019
20
November, 2019
18
May, 2022
10
November, 2018
8
February, 2021
8
July, 2019
7
October, 2017
6
October, 2019
4
August, 2017
1
March, 2019
Available data
389
bed narrowPeak
245
bam
224
bigWig
184
bigBed narrowPeak
178
bed broadPeak
177
bed bed3+
176
bigBed broadPeak
64
xls
41
fastq
5
bed bed3
1
tsv
1
txt
Organism
245
Homo sapiens
Biosample type
245
tissue
114
primary cell
18
in vitro differentiated cells
12
cell line
Organ
69
kidney
51
pancreas
44
limb
32
musculature of body
31
heart
30
brain
18
ureter
8
blood vessel
8
bone element
8
skeleton
8
vasculature
6
artery
5
adipose tissue
5
connective tissue
4
liver
3
eye
3
nerve
2
spleen
Project
245
AMP
Genome assembly (visualization)
226
hg19
222
GRCh38
Lab
226
AMP-T2D consortium
18
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
245 results
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DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
1
38
1
heart
18
muscle of arm
17
brain
14
kidney
13
1
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