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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
323
ChIP-seq
Assay category
323
DNA binding
Target of assay
243
transcription factor
66
recombinant protein
59
control
37
RNA binding protein
18
histone
18
histone modification
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
323
November, 2017
226
May, 2021
110
February, 2021
109
August, 2017
61
November, 2018
60
October, 2019
58
September, 2018
55
June, 2019
48
July, 2018
46
December, 2017
45
May, 2020
43
April, 2018
39
August, 2021
39
February, 2018
27
December, 2018
23
January, 2019
18
July, 2019
14
November, 2019
7
March, 2020
5
December, 2019
5
May, 2019
5
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
324
fastq
323
bam
277
bigWig
255
bed narrowPeak
255
bigBed narrowPeak
64
bed broadPeak
64
bigBed broadPeak
12
tagAlign
3
tar
Organism
323
Homo sapiens
Biosample type
314
cell line
tissue
9
primary cell
Organ
314
liver
9
brain
6
epithelium
6
vasculature
3
blood vessel
Project
323
AMP
Genome assembly (visualization)
275
hg19
223
GRCh38
Lab
323
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
assay_title!
ATAC-seq
biosample_type!
tissue
BIOSAMPLE
ASSAY
323 results
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Clear Filters
ChIP-seq
cell line
HepG2
314
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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