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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
34
DNase-seq
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
42
DNA binding
34
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
30
histone
30
histone modification
20
broad histone mark
12
control
10
narrow histone mark
Date released
41
October, 2019
32
June, 2019
7
May, 2019
1
July, 2019
Available data
81
bam
69
bigWig
64
bed narrowPeak
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
81
Homo sapiens
Biosample type
81
tissue
Organ
678
liver
624
pancreas
588
connective tissue
439
adipose tissue
293
epithelium
241
brain
199
heart
vasculature
169
blood vessel
144
kidney
106
limb
92
artery
60
blood
60
bodily fluid
58
bone element
57
musculature of body
41
nerve
36
embryo
23
spleen
20
vein
18
ureter
7
eye
1
pericardium
1
pituitary gland
Project
81
AMP
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
ATAC-seq
organ_slims!
vasculature
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
DNase-seq
total RNA-seq
WGBS
tissue
tibial nerve
35
2
4
muscle of leg
7
13
1
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
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