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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
total RNA-seq
59
ChIP-seq
15
ATAC-seq
7
single cell RNA-seq
4
DNase-seq
Assay category
15
DNA accessibility
Date released
7
November, 2019
4
May, 2020
4
October, 2019
Available data
15
bam
12
bed narrowPeak
7
bigWig
7
tsv
2
bed bed3+
1
bed bedgraph
1
txt
Organism
15
Homo sapiens
Biosample type
7
in vitro differentiated cells
6
primary cell
1
cell line
1
tissue
Organ
2
epithelium
1
adipose tissue
1
connective tissue
1
liver
1
pancreas
Project
15
AMP
Genome assembly (visualization)
15
hg19
11
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
15 results
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ATAC-seq
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
cell line
EndoC_BH1
1
tissue
adipose tissue(adipose white tissue)
1
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