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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1184
total RNA-seq
1113
ChIP-seq
207
DNase-seq
165
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
1
pCHi-C
Assay category
207
DNA accessibility
Date released
187
June, 2019
9
November, 2018
6
October, 2019
4
August, 2017
1
November, 2020
Available data
207
bam
207
bed narrowPeak
207
bigBed narrowPeak
207
bigWig
205
bed broadPeak
205
bigBed broadPeak
203
bed bed3+
12
fastq
Organism
207
Homo sapiens
Biosample type
177
tissue
29
primary cell
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
207
AMP
Genome assembly (visualization)
205
GRCh38
184
hg19
Lab
207
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
207 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
skeletal muscle myoblast
2
+ See 18 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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