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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
217
ChIP-seq
17
WGBS
16
DNase-seq
6
total RNA-seq
3
ATAC-seq
Assay category
217
DNA binding
19
DNA accessibility
17
DNA methylation
6
Transcription
Target of assay
164
control
52
histone
52
histone modification
36
broad histone mark
16
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
64
November, 2017
29
October, 2018
27
October, 2019
23
May, 2020
22
May, 2019
16
June, 2019
15
April, 2019
13
August, 2017
12
December, 2017
10
July, 2019
9
November, 2018
6
May, 2022
4
December, 2018
4
September, 2017
3
October, 2017
1
January, 2019
1
March, 2019
Available data
259
bam
167
bed narrowPeak
158
tsv
156
txt
133
tagAlign
85
bigWig
83
fastq
68
bigBed narrowPeak
64
xls
17
bed broadPeak
16
bed bed3+
16
bed bedMethyl
16
bigBed bedMethyl
16
bigBed broadPeak
6
csv
1
bedpe bed3+
Organism
258
Homo sapiens
Biosample type
259
tissue
73
cell line
35
primary cell
27
in vitro differentiated cells
Organ
88
brain
42
liver
32
pancreas
24
heart
21
adipose tissue
21
connective tissue
18
blood vessel
18
limb
18
vasculature
11
nerve
10
spleen
8
kidney
7
artery
2
musculature of body
Project
259
AMP
Genome assembly (visualization)
1703
GRCh38
hg19
Lab
252
AMP-T2D consortium
6
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
assembly!
hg19
BIOSAMPLE
ASSAY
259 results
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Clear Filters
ChIP-seq
WGBS
DNase-seq
total RNA-seq
ATAC-seq
tissue
liver
39
layer of hippocampus
19
caudate nucleus
13
1
body of pancreas
9
2
2
islet of Langerhans
5
6
1
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