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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
88
ChIP-seq
6
WGBS
Assay category
98
Transcription
88
DNA binding
6
DNA methylation
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
136
May, 2021
45
May, 2020
6
February, 2021
5
March, 2020
Available data
196
bigWig
186
bam
169
fastq
153
zippedFastqFolder
104
tsv
88
bed narrowPeak
84
tagAlign
4
hic
3
bedpe bed3+
3
cool
Organism
192
Homo sapiens
Biosample type
186
primary cell
4
cell line
2
tissue
Organ
12
pancreas
10
epithelium
Project
AMP
186
T1D
6
HPAP
Genome assembly (visualization)
186
GRCh38
186
hg19
Lab
180
Kyle Gaulton, UCSD
6
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
8
inconsistent ontology term
award.project!
AMP
BIOSAMPLE
ASSAY
192 results
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total RNA-seq
ChIP-seq
WGBS
primary cell
monocyte
53
84
pancreatic alpha cell
6
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 21 more…
cell line
EndoC_BH1
2
2
tissue
islet of Langerhans
2
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