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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
4
ChIP-seq
Assay category
98
Transcription
4
DNA binding
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
52
May, 2021
45
May, 2020
5
March, 2020
Available data
196
bigWig
186
bam
169
fastq
153
zippedFastqFolder
104
tsv
88
bed narrowPeak
tagAlign
4
hic
3
bedpe bed3+
3
cool
Organism
102
Homo sapiens
Biosample type
96
primary cell
4
cell line
2
tissue
Organ
6
pancreas
4
epithelium
Project
AMP
102
T1D
Genome assembly (visualization)
102
GRCh38
102
hg19
Lab
96
Kyle Gaulton, UCSD
6
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
files.file_type!
tagAlign
award.project!
AMP
BIOSAMPLE
ASSAY
102 results
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total RNA-seq
ChIP-seq
primary cell
monocyte
53
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
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cell line
EndoC_BH1
2
2
tissue
islet of Langerhans
2
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