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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
23
DNase-seq
18
WGBS
6
total RNA-seq
3
ATAC-seq
Assay category
26
DNA accessibility
18
DNA methylation
6
Transcription
Date released
23
June, 2019
10
July, 2019
7
November, 2018
6
May, 2022
2
August, 2017
1
March, 2019
1
October, 2017
Available data
198
tsv
197
fastq
157
txt
153
zippedFastqFolder
122
bed narrowPeak
64
xls
57
bigWig
50
bam
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
23
bigBed narrowPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
50
Homo sapiens
Biosample type
42
tissue
7
primary cell
1
cell line
Organ
13
pancreas
12
brain
9
heart
7
kidney
6
epithelium
3
blood vessel
3
connective tissue
3
vasculature
2
adipose tissue
2
spleen
1
limb
1
liver
1
musculature of body
Project
50
AMP
Genome assembly (visualization)
hg19
1735
GRCh38
Lab
43
AMP-T2D consortium
6
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
assembly!
hg19
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
50 results
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DNase-seq
WGBS
total RNA-seq
ATAC-seq
tissue
islet of Langerhans
6
1
body of pancreas
2
2
heart
2
1
adipose tissue
2
aorta
2
+ See 20 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
cell line
HepG2
1
See all biosamples
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