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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
6
DNase-seq
Assay category
28
DNA binding
6
DNA accessibility
Target of assay
25
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
12
August, 2017
8
June, 2019
6
October, 2019
3
December, 2017
2
November, 2019
1
August, 2021
1
May, 2019
1
May, 2021
Available data
84
fastq
80
zippedFastqFolder
34
bam
16
bigWig
9
tsv
6
bed bed3+
6
bed broadPeak
6
bed narrowPeak
6
bigBed broadPeak
6
bigBed narrowPeak
2
tagAlign
0
bed bedMethyl
Organism
34
Homo sapiens
Biosample type
28
primary cell
4
in vitro differentiated cells
2
cell line
Organ
96
liver
88
brain
54
pancreas
34
epithelium
30
connective tissue
29
heart
26
blood vessel
26
vasculature
21
adipose tissue
20
kidney
18
limb
11
nerve
10
spleen
9
artery
7
embryo
6
blood
6
bodily fluid
5
vein
4
musculature of body
1
eye
Project
34
AMP
Genome assembly (visualization)
hg19
284
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assembly!
hg19
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
DNase-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
5
epithelial cell of proximal tubule
2
glomerular visceral epithelial cell
2
+ See 6 more…
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
cell line
EndoC_BH1
2
See all biosamples
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