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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1578
ChIP-seq
1341
total RNA-seq
209
DNase-seq
178
ATAC-seq
113
single cell RNA-seq
84
RNA microarray
18
WGBS
18
small RNA-seq
5
FAIRE-seq
1
MPRA
1
pCHi-C
1
snATAC-seq
Assay category
113
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
8
August, 2021
5
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
Available data
205
tsv
128
fastq
100
bam
100
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
113
Homo sapiens
Biosample type
100
primary cell
13
tissue
Organ
74
pancreas
70
epithelium
13
kidney
4
connective tissue
3
brain
Project
113
AMP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
105
AMP-T2D consortium
8
Katalin Susztak, Upenn
Audit category:
7
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
113 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 13 more…
tissue
kidney
13
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