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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
84
ChIP-seq
18
ATAC-seq
Assay category
98
Transcription
84
DNA binding
18
DNA accessibility
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
135
May, 2021
41
May, 2020
24
May, 2022
Available data
216
bigWig
200
bam
132
bed narrowPeak
92
tsv
84
tagAlign
24
fastq
6
txt
2
bed bed3+
Organism
200
Homo sapiens
Biosample type
176
primary cell
24
tissue
Organ
24
pancreas
Project
176
T1D
24
AMP
Genome assembly (visualization)
194
hg19
176
GRCh38
Lab
2979
AMP-T2D consortium
200
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
200 results
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total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
53
84
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 18 more…
tissue
islet of Langerhans
6
18
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