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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
15
total RNA-seq
10
ATAC-seq
Assay category
118
DNA binding
15
Transcription
10
DNA accessibility
Target of assay
47
histone
47
histone modification
42
transcription factor
29
control
25
narrow histone mark
22
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
178
bed narrowPeak
143
bam
123
tsv
119
bigWig
94
fastq
64
xls
57
txt
50
bigBed narrowPeak
24
tagAlign
20
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
143
Homo sapiens
Biosample type
80
in vitro differentiated cells
48
tissue
8
cell line
4
primary cell
3
stem cell
Organ
67
liver
23
epithelium
21
embryo
Project
143
AMP
Genome assembly (visualization)
118
GRCh38
117
hg19
Lab
143
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
143 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
neural progenitor cell
20
7
10
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
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tissue
liver
38
right lobe of liver
10
cell line
H1-hESC
8
primary cell
hepatocyte
4
stem cell
hESC
3
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