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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
63
ChIP-seq
26
total RNA-seq
14
ATAC-seq
3
single cell RNA-seq
Assay category
201
DNA accessibility
63
DNA binding
29
Transcription
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
293
bam
285
bigWig
256
bed narrowPeak
224
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
76
fastq
29
tsv
1
csv
Organism
293
Homo sapiens
Biosample type
163
tissue
130
primary cell
Organ
82
epithelium
81
kidney
77
pancreas
43
musculature of body
35
heart
32
limb
30
brain
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
293
AMP
Genome assembly (visualization)
285
GRCh38
262
hg19
Lab
293
AMP-T2D consortium
Audit category:
27
inconsistent ontology term
Audit category:
32
missing controlled_by
BIOSAMPLE
ASSAY
293 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic ductal cell
13
4
4
1
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 24 more…
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