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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
DNase-seq
28
ChIP-seq
3
single cell RNA-seq
Assay category
109
DNA accessibility
28
DNA binding
3
Transcription
Target of assay
18
histone
18
histone modification
10
narrow histone mark
8
broad histone mark
7
control
3
RNA binding protein
3
transcription factor
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
222
October, 2019
164
July, 2018
137
June, 2019
115
May, 2019
94
December, 2017
87
November, 2018
76
October, 2018
75
July, 2019
72
September, 2018
59
November, 2019
56
April, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
140
bam
133
bigWig
130
bed narrowPeak
130
bigBed narrowPeak
109
bed bed3+
109
bed broadPeak
109
bigBed broadPeak
3
fastq
3
tsv
Organism
140
Homo sapiens
Biosample type
95
tissue
45
primary cell
Organ
kidney
43
musculature of body
35
heart
32
limb
30
brain
21
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
5
pancreas
2
artery
2
liver
1
adipose tissue
Project
140
AMP
Genome assembly (visualization)
133
GRCh38
117
hg19
Lab
140
AMP-T2D consortium
Audit category:
23
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
140 results
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Clear Filters
DNase-seq
ChIP-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
muscle of leg
13
brain
12
heart left ventricle
3
+ See 25 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
+ See 12 more…
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