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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
423
ChIP-seq
187
DNase-seq
Assay category
423
DNA binding
187
DNA accessibility
Target of assay
247
transcription factor
94
histone
94
histone modification
79
control
66
recombinant protein
54
broad histone mark
41
RNA binding protein
40
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
610
bam
544
bigWig
523
bed narrowPeak
522
bigBed narrowPeak
324
fastq
257
bed broadPeak
251
bigBed broadPeak
187
bed bed3+
78
tagAlign
3
tar
Organism
610
Homo sapiens
Biosample type
314
cell line
232
tissue
64
primary cell
Organ
316
liver
108
brain
81
kidney
43
musculature of body
35
heart
32
limb
26
epithelium
18
connective tissue
18
ureter
13
vasculature
8
blood vessel
7
eye
4
pancreas
2
artery
1
adipose tissue
Project
610
AMP
Genome assembly (visualization)
490
GRCh38
467
hg19
Lab
610
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
610 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
314
tissue
layer of hippocampus
19
heart
18
muscle of arm
17
caudate nucleus
14
1
kidney
13
+ See 38 more…
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
+ See 17 more…
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