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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
DNase-seq
164
ATAC-seq
4
FAIRE-seq
Assay category
1479
DNA binding
1348
Transcription
368
DNA accessibility
16
DNA methylation
Date released
182
June, 2019
45
May, 2020
26
November, 2019
18
May, 2022
14
September, 2018
13
May, 2021
10
August, 2017
10
August, 2021
10
February, 2021
10
November, 2018
9
October, 2019
7
October, 2017
6
July, 2019
5
September, 2017
2
November, 2020
1
March, 2019
Available data
436
bed narrowPeak
368
bam
337
bigWig
231
bigBed narrowPeak
200
bed bed3+
199
bed broadPeak
197
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
Organism
368
Homo sapiens
Biosample type
237
tissue
109
primary cell
18
in vitro differentiated cells
4
cell line
Organ
80
kidney
75
pancreas
44
limb
42
epithelium
42
heart
35
brain
33
musculature of body
23
vasculature
blood vessel
18
ureter
14
artery
14
connective tissue
8
bone element
8
liver
8
skeleton
5
adipose tissue
4
eye
3
nerve
3
vein
2
spleen
Project
368
AMP
Genome assembly (visualization)
343
hg19
298
GRCh38
Lab
349
AMP-T2D consortium
18
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
19
inconsistent ontology term
1
inconsistent replicate
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
368 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
1
38
1
heart
18
muscle of arm
17
brain
14
kidney
13
1
+ See 48 more…
primary cell
monocyte
15
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 46 more…
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
EndoC_BH1
1
HepG2
1
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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