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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1382
ChIP-seq
1283
total RNA-seq
177
DNase-seq
173
ATAC-seq
97
single cell RNA-seq
18
WGBS
14
small RNA-seq
4
FAIRE-seq
1
pCHi-C
Assay category
97
Transcription
18
DNA methylation
Date released
48
July, 2018
43
April, 2018
9
July, 2019
7
November, 2018
3
August, 2018
3
June, 2018
2
August, 2017
Available data
208
tsv
145
fastq
115
bam
114
bigWig
93
zippedFastqFolder
17
bed bedMethyl
17
bigBed bedMethyl
13
txt
8
csv
Organism
115
Homo sapiens
Biosample type
97
primary cell
17
tissue
1
cell line
Organ
78
pancreas
70
epithelium
6
connective tissue
6
heart
brain
2
adipose tissue
2
blood vessel
2
spleen
2
vasculature
1
limb
1
liver
1
musculature of body
Project
115
AMP
Genome assembly (visualization)
114
GRCh38
97
hg19
Lab
115
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
115 results
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single cell RNA-seq
WGBS
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 11 more…
tissue
adipose tissue
2
aorta
2
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
+ See 5 more…
cell line
HepG2
1
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