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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
84
ChIP-seq
45
ATAC-seq
Assay category
188
Transcription
84
DNA binding
45
DNA accessibility
Target of assay
28
transcription factor
27
control
27
histone
27
histone modification
27
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
572
February, 2021
314
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
188
June, 2019
167
October, 2019
164
July, 2018
94
December, 2017
92
May, 2019
85
November, 2018
79
April, 2019
76
October, 2018
72
September, 2018
69
July, 2019
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
11
September, 2017
6
November, 2020
6
October, 2017
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
317
bam
290
bigWig
189
tsv
57
bed narrowPeak
50
tagAlign
35
fastq
30
bigBed narrowPeak
Organism
317
Homo sapiens
Biosample type
200
tissue
90
primary cell
27
cell line
Organ
193
liver
27
blood
27
bodily fluid
7
spleen
Project
272
AMP
45
T1D
Genome assembly (visualization)
290
hg19
237
GRCh38
Lab
272
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
1
inconsistent control
organ_slims!
brain
BIOSAMPLE
ASSAY
317 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
liver
143
50
spleen
7
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
+ See 20 more…
cell line
GM12878
27
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