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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
58
total RNA-seq
10
ATAC-seq
6
DNase-seq
2
WGBS
1
FAIRE-seq
Assay category
73
DNA binding
58
Transcription
17
DNA accessibility
2
DNA methylation
Target of assay
51
histone
51
histone modification
31
broad histone mark
20
narrow histone mark
15
control
7
transcription factor
3
RNA binding protein
Date released
66
February, 2021
50
May, 2019
20
October, 2019
9
July, 2019
4
June, 2019
1
March, 2020
Available data
150
bam
124
bigWig
105
bed narrowPeak
67
tsv
56
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
7
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
tar
Organism
150
Homo sapiens
Biosample type
66
cell line
61
tissue
23
primary cell
Organ
689
pancreas
681
liver
593
connective tissue
442
adipose tissue
317
epithelium
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
150
AMP
Genome assembly (visualization)
129
hg19
128
GRCh38
Lab
150
AMP-T2D consortium
organ_slims!
brain
limb
BIOSAMPLE
ASSAY
150 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
FAIRE-seq
cell line
smooth muscle cell of the coronary artery
6
52
8
tissue
thoracic aorta
16
2
1
ascending aorta
16
1
1
aorta
13
1
2
coronary artery
5
1
2
primary cell
endothelial cell of umbilical vein
17
2
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
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