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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1184
ChIP-seq
947
total RNA-seq
169
DNase-seq
108
ATAC-seq
23
single cell RNA-seq
14
WGBS
12
small RNA-seq
2
FAIRE-seq
1
pCHi-C
Assay category
169
DNA accessibility
Date released
153
June, 2019
7
October, 2019
5
November, 2018
3
August, 2017
1
November, 2020
Available data
169
bam
169
bed narrowPeak
169
bigBed narrowPeak
169
bigWig
167
bed broadPeak
167
bigBed broadPeak
165
bed bed3+
7
fastq
Organism
169
Homo sapiens
Biosample type
143
tissue
24
primary cell
1
cell line
1
in vitro differentiated cells
Organ
79
kidney
36
limb
33
musculature of body
brain
30
heart
18
ureter
17
epithelium
11
vasculature
9
blood vessel
9
connective tissue
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
169
AMP
Genome assembly (visualization)
167
GRCh38
158
hg19
Lab
169
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
brain
pancreas
BIOSAMPLE
ASSAY
169 results
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DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
renal cortex interstitium
11
+ See 24 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
skeletal muscle myoblast
2
+ See 13 more…
cell line
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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