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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1449
ChIP-seq
1212
total RNA-seq
192
DNase-seq
151
ATAC-seq
30
single cell RNA-seq
18
WGBS
18
small RNA-seq
4
FAIRE-seq
1
pCHi-C
Assay category
192
DNA accessibility
Date released
173
June, 2019
9
November, 2018
5
October, 2019
4
August, 2017
1
November, 2020
Available data
192
bam
192
bed narrowPeak
192
bigBed narrowPeak
192
bigWig
190
bed broadPeak
190
bigBed broadPeak
188
bed bed3+
12
fastq
Organism
192
Homo sapiens
Biosample type
177
tissue
13
primary cell
1
cell line
1
in vitro differentiated cells
Organ
79
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
epithelium
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
192
AMP
Genome assembly (visualization)
190
GRCh38
175
hg19
Lab
192
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
192 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
primary cell
cardiac fibroblast
3
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
+ See 5 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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