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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
18
small RNA-seq
7
WGBS
4
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
60
Transcription
7
DNA methylation
6
DNA accessibility
Target of assay
3
control
Date released
506
February, 2021
386
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
211
June, 2019
204
October, 2019
164
July, 2018
94
December, 2017
87
November, 2018
79
April, 2019
76
October, 2018
73
July, 2019
72
September, 2018
70
May, 2019
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
15
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
75
bigWig
73
bam
60
tsv
21
bed bedMethyl
21
bigBed bedMethyl
5
bed narrowPeak
2
bed bed3+
2
bigBed narrowPeak
2
hdf5
Organism
73
Homo sapiens
Biosample type
57
tissue
16
primary cell
Organ
21
heart
16
connective tissue
13
brain
12
adipose tissue
9
blood vessel
vasculature
7
kidney
7
liver
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
73
AMP
Genome assembly (visualization)
71
GRCh38
65
hg19
Lab
73
AMP-T2D consortium
organ_slims!
vasculature
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 17 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 8 more…
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