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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
DNase-seq
17
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
51
DNA accessibility
17
DNA binding
6
Transcription
1
DNA methylation
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
3
control
Date released
61
June, 2019
7
May, 2019
5
July, 2019
2
March, 2020
Available data
86
bigWig
78
bed narrowPeak
75
bam
65
bigBed narrowPeak
64
bed broadPeak
52
bed bed3+
51
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
75
Homo sapiens
Biosample type
62
tissue
13
primary cell
Organ
689
pancreas
681
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
211
heart
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
75
AMP
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
75
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
75 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
tissue
muscle of leg
13
7
1
muscle of arm
17
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
+ See 4 more…
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
1
2
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