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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
4
DNase-seq
2
ATAC-seq
2
total RNA-seq
Assay category
28
DNA binding
6
DNA accessibility
2
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
26
October, 2019
5
May, 2019
3
July, 2019
2
June, 2019
Available data
62
bed narrowPeak
36
bam
29
bigWig
25
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
36
Homo sapiens
Biosample type
cell line
34
tissue
2
primary cell
Organ
626
pancreas
593
connective tissue
442
adipose tissue
315
liver
266
epithelium
243
brain
145
heart
129
kidney
119
vasculature
114
blood vessel
114
limb
66
bone element
57
musculature of body
42
nerve
36
artery
28
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
36
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
36
AMP-T2D consortium
biosample_type!
cell line
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial artery
23
2
1
coronary artery
5
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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