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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
54
total RNA-seq
11
ATAC-seq
5
DNase-seq
2
WGBS
Assay category
54
DNA binding
54
Transcription
16
DNA accessibility
2
DNA methylation
Target of assay
26
histone
26
histone modification
18
broad histone mark
17
control
11
transcription factor
8
narrow histone mark
3
other context
3
other post-translational modification
1
RNA binding protein
Date released
66
February, 2021
26
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
5
May, 2019
3
July, 2019
2
June, 2019
1
October, 2017
Available data
126
bam
101
bigWig
88
bed narrowPeak
59
tsv
38
bigBed narrowPeak
24
fastq
6
tagAlign
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
126
Homo sapiens
Biosample type
66
cell line
58
tissue
2
primary cell
Organ
689
pancreas
681
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
126
AMP
Genome assembly (visualization)
109
GRCh38
107
hg19
Lab
126
AMP-T2D consortium
BIOSAMPLE
ASSAY
126 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
cell line
smooth muscle cell of the coronary artery
6
52
8
tissue
tibial artery
23
1
2
spleen
20
1
1
2
coronary artery
5
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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