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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
ChIP-seq
2
small RNA-seq
1
WGBS
Assay category
6
Transcription
3
DNA binding
1
DNA methylation
Target of assay
3
control
Date released
5
July, 2019
2
June, 2019
2
March, 2020
1
May, 2019
Available data
68
bigWig
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
10
Homo sapiens
Biosample type
6
tissue
4
primary cell
Organ
522
connective tissue
481
pancreas
431
adipose tissue
274
liver
178
epithelium
96
heart
87
vasculature
86
blood vessel
63
artery
58
bone element
41
brain
25
kidney
22
embryo
22
limb
15
nerve
10
musculature of body
10
spleen
7
vein
6
blood
6
bodily fluid
1
eye
1
pericardium
Project
10
AMP
Genome assembly (visualization)
7
GRCh38
6
hg19
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
10 results
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total RNA-seq
ChIP-seq
small RNA-seq
WGBS
tissue
muscle of leg
1
1
psoas muscle
2
skeletal muscle tissue
1
1
primary cell
skeletal muscle satellite cell
1
1
1
skeletal muscle cell
1
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