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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
3
DNase-seq
2
WGBS
1
ATAC-seq
1
FAIRE-seq
Assay category
37
DNA binding
5
DNA accessibility
2
DNA methylation
Target of assay
21
histone
21
histone modification
13
broad histone mark
10
control
8
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
20
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
1
October, 2017
Available data
44
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
24
fastq
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
44
Homo sapiens
Biosample type
24
tissue
20
primary cell
Organ
689
pancreas
681
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
44
AMP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
44
AMP-T2D consortium
organ_slims!
blood
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
DNase-seq
WGBS
ATAC-seq
FAIRE-seq
tissue
spleen
20
1
2
1
primary cell
endothelial cell of umbilical vein
17
2
1
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