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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
9
WGBS
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
65
Transcription
9
DNA methylation
8
DNA accessibility
Target of assay
3
control
Date released
572
February, 2021
363
November, 2017
256
May, 2020
235
May, 2021
230
August, 2017
207
June, 2019
164
July, 2018
132
October, 2019
87
November, 2018
86
May, 2019
82
July, 2019
78
December, 2017
65
October, 2018
57
April, 2019
57
September, 2018
55
November, 2019
49
April, 2018
40
August, 2021
34
December, 2018
31
February, 2018
27
January, 2019
24
May, 2022
14
October, 2017
13
March, 2020
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
85
bigWig
82
bam
65
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
82
Homo sapiens
Biosample type
64
tissue
18
primary cell
Organ
21
heart
16
connective tissue
13
brain
12
adipose tissue
9
blood vessel
9
vasculature
7
kidney
7
liver
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
82
AMP
Genome assembly (visualization)
79
GRCh38
72
hg19
Lab
82
AMP-T2D consortium
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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