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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
1
DNase-seq
Assay category
DNA binding
22
DNA accessibility
Date released
12
August, 2021
5
November, 2019
2
February, 2023
2
October, 2019
1
August, 2017
Available data
145
bam
144
bigWig
131
tsv
22
bed narrowPeak
21
fastq
7
bed bedgraph
7
bedpe bed3+
6
bed bed3+
5
bed bed3
4
hic
3
bigBed narrowPeak
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
22
Homo sapiens
Biosample type
389
tissue
69
primary cell
22
in vitro differentiated cells
12
cell line
Organ
3
connective tissue
Project
22
AMP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
18
AMP-T2D consortium
4
Struan F.A. Grant, CHOP
Audit category:
8
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
22 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
1
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
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