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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
DNase-seq
4
ATAC-seq
Assay category
32
DNA accessibility
25
DNA binding
5
3D chromatin structure
2
Transcription
Date released
24
June, 2019
4
February, 2023
3
October, 2019
1
November, 2020
Available data
144
bam
126
bigWig
103
bed narrowPeak
61
fastq
60
zippedFastqFolder
57
bigBed narrowPeak
32
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
13
tsv
7
bed bed3
7
bed bedgraph
3
txt
1
tar
Organism
32
Homo sapiens
Biosample type
tissue
27
primary cell
4
in vitro differentiated cells
1
cell line
Organ
16
epithelium
10
connective tissue
10
kidney
6
vasculature
5
brain
4
blood vessel
3
heart
2
liver
2
vein
1
eye
1
musculature of body
1
pancreas
Project
32
AMP
Genome assembly (visualization)
28
GRCh38
25
hg19
Lab
32
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
32 results
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DNase-seq
ATAC-seq
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
cell line
Panc1
1
See all biosamples
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