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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
7
DNase-seq
1
Hi-C
Assay category
7
DNA accessibility
1
3D chromatin structure
Date released
4
June, 2019
2
November, 2018
2
October, 2019
Available data
491
bam
462
bigWig
417
tsv
324
fastq
80
zippedFastqFolder
74
bed narrowPeak
32
bigBed narrowPeak
9
bed broadPeak
8
bed bed3+
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
8
Homo sapiens
Biosample type
6
tissue
2
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
18
epithelium
18
ureter
16
connective tissue
13
vasculature
11
blood vessel
8
pancreas
7
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
6
hg19
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
8 results
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DNase-seq
Hi-C
tissue
body of pancreas
4
pancreas
2
cell line
Panc1
1
1
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