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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
334
ChIP-seq
Assay category
334
DNA binding
Target of assay
240
transcription factor
75
histone
75
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
30
narrow histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
334
November, 2017
210
June, 2019
191
October, 2019
185
August, 2017
128
May, 2021
97
May, 2019
80
November, 2018
77
December, 2017
72
May, 2020
65
April, 2019
48
July, 2018
46
September, 2018
45
October, 2018
43
April, 2018
41
July, 2019
40
May, 2024
34
August, 2021
30
December, 2018
21
January, 2019
21
May, 2022
16
February, 2018
14
October, 2017
11
November, 2019
8
February, 2021
8
January, 2018
7
August, 2020
7
February, 2023
7
March, 2020
7
September, 2017
3
August, 2018
3
June, 2018
3
September, 2020
1
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
0
bed bed3+
Organism
334
Homo sapiens
Biosample type
268
cell line
57
tissue
9
primary cell
Organ
268
liver
66
brain
6
epithelium
6
vasculature
3
blood vessel
Project
334
AMP
Genome assembly (visualization)
281
hg19
279
GRCh38
Lab
334
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
334 results
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Clear Filters
ChIP-seq
cell line
HepG2
268
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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