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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
DNase-seq
2
Hi-C
Assay category
39
DNA accessibility
2
3D chromatin structure
Date released
35
June, 2019
4
October, 2019
2
July, 2019
Available data
271
bed narrowPeak
247
bam
242
bigWig
172
bigBed narrowPeak
103
tsv
45
bed broadPeak
45
bigBed broadPeak
41
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
fastq
6
hic
6
tagAlign
5
bedpe bed3+
2
hdf5
1
tar
Organism
41
Homo sapiens
Biosample type
30
tissue
11
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
41
AMP
Genome assembly (visualization)
39
GRCh38
37
hg19
Lab
41
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
41 results
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DNase-seq
Hi-C
tissue
heart
18
heart left ventricle
3
coronary artery
2
right atrium auricular region
2
tibial artery
2
+ See 3 more…
primary cell
cardiac fibroblast
3
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
+ See 2 more…
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