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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
177
DNase-seq
4
ATAC-seq
1
snATAC-seq
Assay category
182
DNA accessibility
50
DNA binding
1
3D chromatin structure
Date released
163
June, 2019
9
November, 2018
5
October, 2019
4
February, 2023
1
May, 2022
Available data
423
bed narrowPeak
275
bam
242
bigWig
189
bigBed narrowPeak
182
bed bed3+
180
bed broadPeak
178
bigBed broadPeak
64
xls
42
fastq
11
bed bed3
7
bed bedgraph
4
txt
2
tsv
Organism
182
Homo sapiens
Biosample type
177
tissue
primary cell
4
in vitro differentiated cells
1
cell line
Organ
68
kidney
36
limb
33
musculature of body
27
brain
27
heart
18
ureter
7
pancreas
6
connective tissue
5
blood vessel
5
vasculature
4
artery
3
eye
3
liver
2
adipose tissue
2
nerve
1
spleen
Project
182
AMP
Genome assembly (visualization)
177
GRCh38
166
hg19
Lab
182
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
1
audit script error
biosample_type!
primary cell
BIOSAMPLE
ASSAY
182 results
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DNase-seq
ATAC-seq
snATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
cell line
Panc1
1
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