Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
4
ATAC-seq
2
Capture-C
Assay category
11
DNA binding
4
DNA accessibility
Target of assay
8
histone
histone modification
6
transcription factor
5
control
4
broad histone mark
4
narrow histone mark
Date released
7
August, 2017
4
December, 2017
4
February, 2023
2
August, 2021
Available data
212
bam
181
bigWig
131
tsv
76
fastq
54
bed narrowPeak
17
bed bed3+
14
tagAlign
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
5
bigBed narrowPeak
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
193
tissue
34
primary cell
17
in vitro differentiated cells
3
cell line
1
stem cell
Organ
13
connective tissue
1
embryo
Project
17
AMP
Genome assembly (visualization)
17
hg19
11
GRCh38
Lab
15
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
Audit category:
4
inconsistent control read length
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
Capture-C
in vitro differentiated cells
adipocyte
7
1
1
immature adipocyte
2
Posterior foregut
1
definitive endodermal cell
1
osteoblast
1
+ See 3 more…
See all biosamples
Download