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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
4
ATAC-seq
2
Capture-C
Assay category
12
DNA binding
4
DNA accessibility
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
control
4
narrow histone mark
Date released
12
December, 2017
August, 2017
4
February, 2023
2
August, 2021
Available data
237
bam
211
bigWig
131
tsv
89
bed narrowPeak
87
fastq
26
tagAlign
18
bed bed3+
16
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
Organism
18
Homo sapiens
Biosample type
179
tissue
37
primary cell
18
in vitro differentiated cells
3
cell line
3
stem cell
Organ
6
connective tissue
3
embryo
Project
18
AMP
Genome assembly (visualization)
18
hg19
12
GRCh38
Lab
16
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
Audit category:
4
inconsistent control read length
month_released!
August, 2017
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
ATAC-seq
Capture-C
in vitro differentiated cells
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
adipocyte
1
1
immature adipocyte
2
osteoblast
1
preadipocyte
1
See all biosamples
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