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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
3
Hi-C
Assay category
34
DNA accessibility
3
3D chromatin structure
Date released
30
June, 2019
3
July, 2019
2
November, 2018
2
October, 2019
Available data
285
bam
253
bigWig
230
bed narrowPeak
153
bigBed narrowPeak
118
tagAlign
49
bed broadPeak
40
bigBed broadPeak
37
bed bed3+
31
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
37
Homo sapiens
Biosample type
29
tissue
8
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
37
AMP
Genome assembly (visualization)
34
GRCh38
27
hg19
Lab
37
AMP-T2D consortium
files.file_type!
ibed
BIOSAMPLE
ASSAY
37 results
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DNase-seq
Hi-C
tissue
brain
14
frontal cortex
2
tibial nerve
2
Ammon's horn
1
caudate nucleus
1
+ See 9 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
choroid plexus epithelial cell
1
See all biosamples
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