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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
Assay category
68
DNA binding
Target of assay
90
histone
90
histone modification
68
transcription factor
48
broad histone mark
42
narrow histone mark
11
RNA binding protein
9
control
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
47
November, 2017
21
August, 2017
Available data
496
bigWig
485
bam
469
bed narrowPeak
454
fastq
405
bigBed narrowPeak
49
bed broadPeak
49
bigBed broadPeak
19
bed bed3+
9
tagAlign
3
tar
Organism
68
Homo sapiens
Biosample type
44
cell line
13
tissue
6
in vitro differentiated cells
5
primary cell
Organ
46
liver
10
connective tissue
7
pancreas
4
adipose tissue
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
68
AMP
Genome assembly (visualization)
68
hg19
55
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
cell line
HepG2
44
tissue
islet of Langerhans
7
white adipose tissue
4
liver
2
in vitro differentiated cells
adipocyte
6
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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