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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
2
DNase-seq
Assay category
46
DNA binding
2
DNA accessibility
Target of assay
23
histone
23
histone modification
21
transcription factor
12
broad histone mark
11
narrow histone mark
4
RNA binding protein
2
control
1
chromatin remodeller
Date released
187
June, 2019
64
November, 2017
48
August, 2017
15
December, 2017
10
October, 2019
9
November, 2018
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
287
fastq
282
bam
272
bigWig
142
bed narrowPeak
89
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
48
Homo sapiens
Biosample type
26
tissue
14
primary cell
8
in vitro differentiated cells
Organ
19
pancreas
12
connective tissue
4
adipose tissue
3
liver
Project
48
AMP
Genome assembly (visualization)
48
hg19
46
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
4
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
islet of Langerhans
19
white adipose tissue
4
liver
3
primary cell
skeletal muscle myoblast
13
1
in vitro differentiated cells
adipocyte
7
1
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